Table 3 Sequence variations in non-F2 type mtDNAs. When the analyzed sequence was identical to the revised Cambridge reference sequence, items are indicated with CRS. When (a) nucleotide change(s) was detected compared to the CRS sequence, only the number of position is indicated for transition, the number with a suffix (i.e. A, C, G, and T) for transversion, with “d” for deletion and with “+” for insertion. When sequence information was not available, items leave blank
Samplea | Location | Haplogroup | HVS-I (16000+) | HVS-II (30–407) (73, 263, and 315+C in addition)b | 10171–10659 (10000+)c | Nucleotide at 12338 | Other polymorphisms | References |
|---|---|---|---|---|---|---|---|---|
Man10 | Fengcheng, Liaoning | F1 | 302 304 497 | 310 609 | T | 12406 | This study | |
Man17 | Fengcheng, Liaoning | F1 | 302 304 497 | 310 609 | T | 12406 | This study | |
Li26 | Hainan | F1 | 172 187 304 343 519 | 249d 309+C | 310 609 | T | 12406 | This study |
QJ81 | Qijiang, Chongqing | F1 | 172 304 465 519 | 249d 309+C | 310 609 | T | 12406 | This study |
Zhuang73 | Luocheng, Guangxi | F1 | 172 304 465 | Yao et al. (2002c) | ||||
GD0091 | Chaoshan, Guangdong | F4 | 207 304 399 | 146 152 281 249d 309+C | 310 | T | This study | |
YND617 | Kunming, Yunnan | F4 | 179 207 304 399 | 146 249d 309+CC | 310 | T | This study | |
QH9678 | Qinghai | F4 | 207 304 362 399 | 310 | T | This study | ||
XJ8440 | Yili, Xinjiang | F4 | 207 304 362 399 | 146 152 249d | 310 | T | 12396 12408 | Yao et al. (2002a) |
Zhuang30 | Guangxi | F4 | 126 140 207 304 362 399 | Yao et al. (2002c) | ||||
YNC237 | Kunming, Yunnan | F4 | 207 304 362 399 497 | 146 152 249d | 310 | T | 12396 12408 | This study |
YND379 | Kunming, Yunnan | F4 | 093 207 304 362 399 497 | 146 152 207 249d 309+C | 310 | T | 12396 12408 | This study |
Mulam6 | Luocheng, Guangxi | F* | 218 304 311 | 310 | T | This study | ||
Li56 | Hainan | F* | 218 304 311 519 | 249d 309+C | 310 | T | This study | |
Zhuang43 | Guangxi | F* | 129 218 265 304 311 355 | Yao et al. (2002c) | ||||
Mulam42 | Luocheng, Guangxi | R9* | 304 362 | CRS | CRS | T | This study | |
Dai100 | Xishuangbanna, Yunnan | R9* | 304 362 | CRS | CRS | T | Yao et al. (2002c) | |
She61 | Fuquan, Guizhou | R9* | 157 256 266 304 311 335 | 236 249d | CRS | This study | ||
YN170 | Kunming, Yunnan | R9* | 157 256 304 335 | 236 249d | CRS | Yao et al. (2002a) |
