Table 1 Global statistics of P. miliaceum genome assembly and annotation

From: The genome of broomcorn millet

 

Number

Size

Assembly feature

 Estimated genome size

 

923 Mb

 Total scaffolds (≥1000 bp)

1,309

855 Mb

 Undetermined bases

1.98%

16.9 Mb

 Scaffold N50

8

46,662 kb

 Longest scaffold

 

66,885 kb

 Pseudochromosomes

18

822 Mb

 Anchored contigs

4,146

805 Mb

 Anchored and oriented contigs

3,242

722 Mb

 Total contigs

5,541

838 Mb

 Contig N50

423

369 kb

 Longest contig

 

5222 kb

 GC content

46.8%

 

Genome annotation

 Repetitive sequences

58.2%

495 Mb

 Protein-coding genes

55,930

181 Mb

 Genes in pseudochromosomes

55,527 (99.3%)

 

 Noncoding RNAs

9643

1.5 Mb