Fig. 1: Repeated elements abundance in white lupin genome.
From: High-quality genome sequence of white lupin provides insight into soil exploration and seed quality
a Proportion of single copy and repeated sequences for the different classes of repeats. b Density distribution along the chromosomes of the repetitive classes. A. genes, B. CRM, C. satDNA, D. Tekay, and E. SIRE. Density is represented in 0.5 Mb bins. c FISH mapping of the main repeats by super-resolution microscopy (3D-SIM). (1) Co-localization of CRWL and CL2 satDNA on centromeric regions of meiotic (pachytene) chromosomes. (2–3) Distribution of the most abundant satellite DNAs CL1, CL2, and CL10 in somatic metaphase chromosomes. Bars are 10 µm (1) and 2 µm (2 and 3). d LalbCENH3-ChIPseq reads mapped against the first 100 RepeatExplorer clusters of the WL genome. The main centromeric sequences found in LalbCENH3-ChIPseq are highlighted. e Typical centromere composition of a WL chromosome, chromosome 14. Source data underlying Fig. 1d are provided as a Source Data file.
