Fig. 6: HLA variants associated with the T1D risk identified through trans-ethnic fine-mapping. | Nature Communications

Fig. 6: HLA variants associated with the T1D risk identified through trans-ethnic fine-mapping.

From: A deep learning method for HLA imputation and trans-ethnic MHC fine-mapping of type 1 diabetes

Fig. 6

Forest plots for individual risk-associated alleles are displayed along with a ___location map of classical HLA genes. Each forest plot shows the estimated odds ratio (OR) and 95% confidence interval from cohort-specific logistic model for BBJ and UKB, and the transethnic logistic model. Red dashed lines indicate OR in transethnic cohorts. Black solid lines represent OR = 1. Colored square boxes represent amino acid polymorphisms of the same position or a classical allele. Source data are provided as a Source Data file. BBJ BioBank Japan, UKB UK Biobank.

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