Table 1 Geotemporal distribution of 1935 S. sonnei genomes in the discovery dataset.
Region | Country | Year(s) of isolation | No. of isolates | |
|---|---|---|---|---|
Africa | Total | 1967–2006 | 19 (0.98%) | |
Central Africa | Cameroon | 1973 | 1 | |
East Africa | Madagascar | 1998–2000 | 3 | |
Kenya, Tanzania | 2004 | 2 | ||
Northern Africa | Egypt | 2005–2006 | 4 | |
Morocco | 2005–2006 | 4 | ||
West Africa | Senegal | 1967–2006 | 4 | |
Burkina Faso | 2006 | 1 | ||
Asia | Total | 1979–2014 | 627 (32.4%) | |
Central Asia | Uzbekistan | 2005 | 1 | |
Eastern Asia | Korea | 1979–2003 | 20 | |
Southern Asia | Bhutan | 2011–2013 | 71 | |
India | 2013–2014 | 24 | ||
Pakistan | 2002–2003 | 7 | ||
Other (Nepal, Iran, Sri Lanka) | 2003–2006 | 3 | ||
Southeast Asia | Cambodia | 2013–2014 | 4 | |
Thailand | 1994–2013 | 9 | ||
Vietnam | 1995–2015 | 266 | ||
Western Asia | Israel | 1992–2014 | 222 | |
Europe | Total | 1943–2016 | 567 (29.3%) | |
Northern Europe | United Kingdom | 1990–2016 | 393 | |
Ireland | Unknown | 5 | ||
Sweden | 1943–1947 | 6 | ||
Denmark | 1945 | 1 | ||
Western Europe | France | 1945–2014 | 158 | |
Belgium | 2008 | 3 | ||
Germany | Unknown | 1 | ||
Northern America | Total | 1994–2015 | 16 (0.8%) | |
North America | USA | 2004–2015 | 13 | |
Other (unknown) | 1994–1995 | 3 | ||
Latin America and the Caribbean | Total | 1997–2014 | 337 (17.4%) | |
Caribbean | Cuba, Dominican Republic, Haiti | 2003–2006 | 3 | |
Central America | Costa Rica | 2002–2010 | 50 | |
Guatemala | 2011–2012 | 30 | ||
Mexico | 1998 | 1 | ||
South America | Argentina | 2002–2011 | 50 | |
Brazil | 1997–2002 | 7 | ||
Chile | 2010–2011 | 27 | ||
Colombia | 2008–2011 | 30 | ||
French Guiana | 1998–2006 | 3 | ||
Paraguay | 2008–2012 | 18 | ||
Peru | 1999–2012 | 49 | ||
Uruguay | 2000–2011 | 28 | ||
Venezuela | 1997–2014 | 41 | ||
Australia and Oceania | Total | 1997–2018 | 364 (18.8%) | |
Australia | Australia | 2016–2018 | 363 | |
Oceania | New Caledonia | 1997 | 1 | |
Unknown | Total | Unspecified | 5 (0.5%) |
