Fig. 3: hTSCs lack intrinsic expression of representative antiviral ISGs. | Nature Communications

Fig. 3: hTSCs lack intrinsic expression of representative antiviral ISGs.

From: Zika virus targets human trophoblast stem cells and prevents syncytialization in placental trophoblast organoids

Fig. 3

a Venn diagram showing the number of ISGs specifically expressed in hTSCs, STBTS and EVTTS, and shared by all the cell types. b Heatmap showing the z-score TPM of ISGs with high and low expression in hTSCs, STBTS and EVTTS. c Quantification of the expression of ISGs with high and low expression shown by RNA-seq in hTSCs, STBTS and EVTTS by qRT-PCR. n = 3 independent experiments. Data are shown as the mean ± s.d. d PCA analysis of the transcriptomes of mock- and ZIKV-infected hTSCs, STBTS and EVTTS. The cells were exposed to ZIKV at an MOI of 1, and analyzed at 48 hours post infection. e Venn diagram showing the number of ISGs specifically up-regulated in hTSCs, STBTS and EVTTS following ZIKV infection and shared by all the cell types. f Heatmap showing the up-regulated ISGs in hTSCs, STBTS and EVTTS. g Quantification of the relative expression of ISGs in ZIKV-infected hTSCs compared to in mock-infected hTSCs by qRT-PCR. The hTSCs were infected with ZIKV at an MOI of 1 and the infected cells were separated by FACS for qRT-PCR analysis at 48 hours post infection. n = 3 independent experiments.

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