Fig. 5: New peaks in reference and adaptive cell states.
From: The chromatin landscape of healthy and injured cell types in the human kidney
a, b Gene alignment of SLC5A12, a PT-S12 marker, and PROM1, an aPT marker, across snATAC-seq peaks (N = 12), DNAm TI dips (N = 15), and CUT&RUN histone marks H3K27ac (N = 10), H3K27me3 (N = 6), H3K4me1 (N = 3), and H3K4me3 (N = 3). Red stripe indicates new peaks (NP) with transcription factor (TF) binding. c Differentially expressed TFs of the aPT and PT-S12 which target NP of PROM1 and SLC5A12. d, e Chord diagram of SLC5A12 and PROM1, respectively, with TFs (TRUE = positive binding or DNAm Dip and FALSE = no binding or no DNAm Dip).
