Fig. 1: Design and characterization of CRBNmidi.
From: Design of a Cereblon construct for crystallographic and biophysical studies of protein degraders

a Domain composition of full-length CRBN (top), constructs previously used for structural and biophysical characterization, CRBNΔN and CRBNTBD, and constructs 1–15 designed in this study. The most promising construct 8 was designated as CRBNmidi. Mutated residues are indicated as blue lines. b Ni-NTA affinity pull-down assay of lysates from E. coli BL21(DE3) cells expressing candidate constructs 1–15 with an N-terminal His6 (H) or His6-MBP (M) tag. The expected size of each construct is marked with a yellow arrow. The experiment was performed as one replicate. Uncropped gels are provided as a Source Data file. c Crystal structure of CRBNmidi in the apo state, containing Lon (yellow), HB (orange) and TBD (red) domains. The mutated residues are indicated (blue), the unresolved region containing the GSG linker is shown as blue dashed line, and Zn2+ is shown as a purple sphere. d Superposition of apo CRBNmidi (yellow, orange, red) with CRBNΔN:DDB1 bound to lenalidomide (grey, PDB ID: 4TZ410). DDB1 is shown as a grey surface.