Fig. 4: Pseudotime inference on cytometry data helps to describe continuous developmental processes. | Nature Communications

Fig. 4: Pseudotime inference on cytometry data helps to describe continuous developmental processes.

From: Unveiling the power of high-dimensional cytometry data with cyCONDOR

Fig. 4

a Schematic overview of the subsetting workflow implemented in cyCONDOR. b UMAP of all bone marrow cells colored by annotated cell type. c UMAP of the subset of monocytes, pDCs and their progenitors colored by annotated cell type. d Schematic overview of the pseudotime inference workflow implemented in cyCONDOR. e UMAP colored according to the inferred pseudotime of the predicted trajectories. f Heatmap of protein expression in cells belonging to the monocytes trajectory ordered according to the inferred pseudotime. Created in BioRender. Bonaguro, L. (2024) https://biorender.com/x99o393.

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