Fig. 4: CRWN1–chromatin interactions and gene expression changes during heat-stress response.
From: The plant nuclear lamina disassembles to regulate genome folding in stress conditions
a, For CRWN1 target genes, their interaction profile with CRWN1 is shown according to gene expression levels. ‘Int.’ stands for the intermediate level; ‘start’ and ‘end’ depict transcription start site and transcription termination site, respectively. b, Changes of gene expression under heat stress. Genes enriched by CRWN only in control or heat-stressed plants are labelled as ‘M-specific’ or ‘H-specific’, respectively. Genes enriched in both conditions are labelled as ‘MH’. The y axis depicts differences in reads per kilobase million. The box plots indicate the median (line within the box), the lower and upper quartiles (box), margined by the largest and smallest data points that are still within the interval of 1.5 times the interquartile range from the box (whiskers); outliers are not shown. p values indicate the two-sided Mann–Whitney U-test results. c, CRWN1–chromatin interactions across differentially expressed genes in the ‘MH’ group defined in b.
