Extended Data Fig. 4: Correlation between ASVs from different murine gut compartments.
From: SAMPL-seq reveals micron-scale spatial hubs in the human gut microbiome
(a) Clustered heatmap of prevalent mouse ASVs grouped by gut compartments, with summed abundances at the end of the row. ASVs are clustered by Jaccard overlap across the dataset. (b, c) Correlation between ASV relative abundance (b) and prevalence among particles (c) between mouse gut compartments. Colon and feces samples showed the highest correlation among samples. (d) Principal Coordinate Analysis (PCoA) plot of particles derived from different mouse gut compartments using Simpson distance, colored by gut compartments. Dashed circles correspond to the 95% confidence interval for each compartment using the multivariate t-distribution.
