Extended Data Fig. 6: Analysis of peripheral CD8+ TEMRA cells by scRNA-seq.
From: Clonally expanded CD8 T cells patrol the cerebrospinal fluid in Alzheimer’s disease
a, Gating strategy for sorting peripheral CD8+ TEMRA cells for scRNA-seq. b, Differential expression analysis by scRNA-seq of CD8+ TEMRA cells from patients with MCI or AD versus CD8+ TEMRA cells from healthy individuals shows significantly increased expression of genes that are involved in T cell signalling, including IFITM3, NFKBIA and CD8B2. Violin plots show average log-normalized counts for significantly upregulated genes in MCI or AD CD8+ TEMRA cells by individual patient (n = 7 healthy; n = 6 MCI or AD). c, Violin plots show average log-normalized counts for significantly upregulated genes in MCI or AD CD8+ TEMRA cells by group. GAPDH is shown as a control. Each dot represents a single cell.
