Extended Data Fig. 3: Footprint-to-nucleosome prediction. | Nature

Extended Data Fig. 3: Footprint-to-nucleosome prediction.

From: Multiscale footprints reveal the organization of cis-regulatory elements

Extended Data Fig. 3

a, Tracks showing observed Tn5 insertion, nucleosome occupancy predicted by NucleoATAC and our footprint-to-nucleosome model, as well as ground truth nucleosome occupancy measured by chemical mapping. b, c, Precision-recall curve of NucleoATAC and PRINT for nucleosome mapping. Predicted nucleosome centres are considered to be a true positive prediction if it is within 75 bp (c) or 50 bp (d) from the nearest ground truth nucleosome centre. d-f, Line plots showing the relationship between model performance and local coverage or distance to nearest cCRE.

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