Extended Data Fig. 9: Impact of the pathogen’s mutation rate on the optimal Hamming distance threshold to apply our RR framework. | Nature

Extended Data Fig. 9: Impact of the pathogen’s mutation rate on the optimal Hamming distance threshold to apply our RR framework.

From: Fine-scale patterns of SARS-CoV-2 spread from identical pathogen sequences

Extended Data Fig. 9

Boxplots indicate Spearman correlation coefficients between the relative risk of pairs of sequences below the genomic distance threshold of being observed in two regions and the daily migration probability between these two regions. Boxplots indicate the 2.5%, 25%, 50%, 75% and 97.5% percentiles. See Methods for a description of the simulation approach.

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