Supplementary Figure 15: Comparison of cell clusters from scRNA-seq.
From: Lung regeneration by multipotent stem cells residing at the bronchioalveolar-duct junction
(a) t-SNE of 480 scRNA-seq profiles (points), colored by expression of selected AT2, Club cell and Ciliated cell markers. (b) Pearson correlation coefficients (r) between 4 cell clusters. (c,d) Distribution of expression levels of Plin2 and Lrg1 in each cell cluster, Violin plots show the Gaussian kernel probability densities of the data. (e-h) t-SNE plot of 455 scRNA-seq profiles (points) including AT2, BASCs-1, BASCs-2 and Club cell clusters, showing genes enriched in BASCs-1 (e,f) and BASCs-2 (g,h) subpopulation.
