Extended Data Fig. 4: Transcription factor binding site analysis.
From: A barley pan-transcriptome reveals layers of genotype-dependent transcriptional complexity
a, Percent identities for transcription factor binding sites (TFBS) in 500 bp segments of 2 kb upstream (regions from A to D) and 500 bp downstream (region E) of start codon computed for each genotype vs. Morex. The x axis indicates 30 TFBS consensus sequences with a code from 1 to 30 (see Methods for details). b, Percent TFBS identities against percent coherent expression in each pairwise comparison (individual genotypes vs. Morex, each pair represented by a dot) for all genes (15,001 genes Pearson correlation value = 0.395), genes with low coefficient of variation (CV; 0–0.4 CV, 2,999 genes, corr. = 0.695) and genes with high CV (1.48–20 CV, 2,994 genes, corr. = 0.087).
