Extended Data Fig. 3: scMicro-C retains protein occupancy information. | Nature Genetics

Extended Data Fig. 3: scMicro-C retains protein occupancy information.

From: Single-cell Micro-C profiles 3D genome structures at high resolution and characterizes multi-enhancer hubs

Extended Data Fig. 3

a, Heatmap shows the normalized nucleosome occupancy around CTCF motif (left) and active TSS (right). Each row represents a single cell, scMicro-C and Dip-C data were shown. b, Line plot shows the normalized nucleosome occupancy around CTCF (top) and active TSS (bottom), two bulk Micro-C replicates and ensemble scMicro-C are shown. c, Genomic track shows the nucleosome occupancy around LSM1 gene locus. d, Line plot shows transcription factor footprinting, calculated by detected ligation junction around corresponding TF motif.

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