Extended Data Fig. 9: Sequence and structure alignments of KpLptD and EcLptA.
From: Dynamics of an LPS translocon induced by substrate and an antimicrobial peptide
a, Sequence alignment between KpLptD and EcLptA. Red color indicates conserved residues, yellow indicates highly similar residues. Circles indicate crucial residues for LptA-thanatin interaction. Blue color represents van-der-Waals interactions while green represents ionic bridges and H-bonds. b, Structure alignment of LptD (PDB ID: 5IV9) with apo-LptA (PDB ID: 2R1A). The RMSD is equal to 1.48 Å over 115 Cα.
