Table 3 Determination of fetal sex, fetal DNA fraction, and fetal haplotype in each family.

From: Noninvasive prenatal diagnosis of 21-Hydroxylase deficiency using target capture sequencing of maternal plasma DNA

Plasma sample

Fetal sex

Fetal DNA fraction

Paternal informative SNP

Maternal informative SNP

P-Hap

M-Hap

Fetal genotype

Fetal status

F-01

F

11.08%

769

866

F0

M1

Del/WT

carrier

F-02-F

F

6.88%

830

534

P0

M0

IVS2-13A/C > G/Del

affected

F-02-S

F

9.49%

831

534

P0

M1

Del/WT

carrier

F-03

F

5.50%

675

818

P0

M1

IVS2-13A/C > G/WT

carrier

F-04 8wk

F

7.82%

648

1330

P0

M0

p.Ile172Asn/Chimera

affected

F-04 18wk

F

8.15%

649

1330

P0

M0

p.Ile172Asn/Chimera

affected

F-05

M

8.41%

545

620

P0

M0

IVS2-13A/C > G + promoter conversion/Del

affected

F-06

M

14.28%

800

1024

P0

M1

Del/WT

carrier

F-07

F

9.28%

477

640

P0

M1

Del/WT

carrier

F-08

F

5.84%

524

841

P1

M0

p.Ile172Asn/WT

carrier

F-09

M

12.00%

583

806

P0

M0

IVS2-13A/C > G/p. [Ile172Asn; Arg356Trp]

affected

F-10

M

13.18%

620

829

P1

M0

Del/WT

carrier

F-11

M

15.54%

814

715

P0

M0

p.[Gln318X; Arg356Trp]/Chimera

affected

F-12

F

8.61%

393

711

P0

M0

IVS2-13A/C > G/Partial conv

affected

  1. Abbreviantions: Paternal informative SNP: SNP that was uniquely identified in one paternal haplotype; Maternal informative SNP: SNP that was uniquely identified in one maternal haplotype; Pat-Hap, paternal inherited haplotype; Mat-Hap, maternal inherited haplotype; P0, paternal haplotype linked with pathogenic mutation; P1, paternal haplotype linked with wild-type allele; M0, maternal haplotype linked with pathogenic mutation; M1, maternal haplotype linked with wild-type allele; WT: wild-type allele.