Table 1 Extracted morphological and textural features of collagen fibers from SHG processed images.

From: Deep learning enables automated scoring of liver fibrosis stages

No.

Feature Descriptions

Morphological Features

1

Total number of collagen fibers

2–3

Median and variance of fiber orientation

4–6

Median, total and variance of fiber length

7–9

Median, total and variance of fiber width

10

Total perimeter of collagen fibers

11–14

No. of long & short and thick & thin fibers

15–16

Ratio of short/long fibers and thin/thick fibers

17–19

Median, total and variance of fiber area

20

Collagen mean intensity

21

Fiber proportionate area (CPA)

Texture Features

22

Entropy

23–34

Contrast, correlation, energy and homogeneity from the GLCM given three different pixel distances at two, four, eight pixels

35–40

Energy, entropy, mean, standard deviation, third moment and fourth moment of the coefficients from Fouriers transform

41–100

Energy, entropy, mean, standard deviation, third moment and fourth moment of the wavelet decomposition coefficients from ten sub-images generated by Daubechies wavelet transform

101–130

Energy, entropy, mean, standard deviation, third moment and fourth moment of the magnitude of the convolution over the image with Gabor filters at five scales