Table 3 Comparison of the amino acid pairwise identity of 7 conserved coronavirus domains in the poly1ab protein of Canada goose coronavirus to other gammacoronaviruses.
Domain | aa % identity to IBV | aa % identity to TCoV | aa % identity to DCoV | aa % Identity to SW1 |
---|---|---|---|---|
ADP-ribose-1″-phosphatase | 42 | 43 | 38 | 23 |
3C-like Protease | 56 | 58 | 57 | 49 |
RdRp | 80 | 80 | 83 | 69 |
Helicase 1 | 89 | 90 | 92 | 78 |
Exonuclease | 78 | 72 | 77 | 56 |
Endoribonuclease | 53 | 53 | 54 | 41 |
Ribose-2′-O methyltransferase | 74 | 77 | 76 | 65 |
Average | 67 | 68 | 68 | 54 |