Table 1 Obtain the RNA-Seq clean data.
Sample | Raw data | Q20(%) | Clean data | Q20(%) |
|---|---|---|---|---|
FP-45d-1 | 10474685176 | 9415987952 (89.89%) | 9205473650 | 8504592068 (92.39%) |
FP-45d-2 | 11576565094 | 10401228718 (89.85%) | 10442107411 | 9615872599 (92.09%) |
FP-45d-3 | 11516657958 | 10417424323 (90.46%) | 9297102448 | 8633474874 (92.86%) |
FP-55d-1 | 11574536258 | 10458779016 (90.36%) | 9984099030 | 9265615364 (92.80%) |
FP-55d-2 | 10099252970 | 8833019818 (87.46%) | 7981216720 | 7232763577 (90.62%) |
FP-55d-3 | 14361793616 | 12887754687 (89.74%) | 12675556365 | 11691886261 (92.24%) |
FP-65d-1 | 10425039698 | 9366852432 (89.85%) | 9148801979 | 8449997648 (92.36%) |
FP-65d-2 | 11213896918 | 10093011637 (90.00%) | 9502256844 | 8801158209 (92.62%) |
FP-65d-3 | 11291800536 | 10268565021 (90.94%) | 10097029771 | 9399156690 (93.09%) |
FP-75d-1 | 3802435500 | 3561521649 (93.66%) | 3723142144 | 3507969123 (94.22%) |
FP-75d-2 | 4234597500 | 3973241698 (93.83%) | 4145546791 | 3911512268 (94.35%) |
FP-75d-3 | 3387849000 | 3173001276 (93.66%) | 3315942774 | 3123835278 (94.21%) |
FP-95d-1 | 3796614900 | 3559327755 (93.75%) | 3716462474 | 3504404467 (94.29%) |
FP-95d-2 | 3778704000 | 3544061516 (93.79%) | 3696702322 | 3487323617 (94.34%) |
FP-95d-3 | 3376559100 | 3147221091 (93.21%) | 3296243262 | 3093396327 (93.85%) |
FP-115d-1 | 3565607700 | 3335669909 (93.55%) | 3486027899 | 3281285963 (94.13%) |
FP-115d-2 | 3556965600 | 3319319387 (93.32%) | 3477546153 | 3265864880 (93.91%) |
FP-115d-3 | 3451999200 | 3245621202 (94.02%) | 3387012229 | 3200797881 (94.50%) |
FP-135d-1 | 3599433900 | 3370862722 (93.65%) | 3524056472 | 3319484507 (94.19%) |
FP-135d-2 | 3405073200 | 3196649921 (93.88%) | 3337974518 | 3151203478 (94.40%) |
FP-135d-3 | 3083014200 | 2886040524 (93.61%) | 3019391433 | 2843133915 (94.16%) |
