Figure 3

Bulk HI concordance data using clinical OP/NP samples. (a) Concordance of SARS-CoV-2 RT-qPCR test results for clinical OP/NP samples which tested positive in either the standard clinical assay or using the bulk HI protocol, and binned according to the clinical assay Cq. (b) Distribution of change in Cq value (Clinical Cq—Experimental Cq) versus the clinical test for the primary bulk HI protocol (bulk HI) and variations (deliberate delay of 10 or 24 h post HI, or the fall-back method of a second HI step in the lab (2HI). (c) Selected samples from (a) showing the impact of bulk HI on RT-qPCR detection is not Cq dependent. Data was plotted using R (v4.1.0 “Camp Pontanezen”) with ggplot2 (v3.3.3) and the figure was assembled using Affinity Designer (1.9.3).