Table 2 Organization of repetitive sequences in the Cluster bean genome.

From: The chromosome-scale genome assembly of cluster bean provides molecular insight into edible gum (galactomannan) biosynthesis family genes

 

Number

Length occupied (bp)

Total repeats (%)

Genome (%)

Total Retrotransposons

378584

163,602,743

70.55

29.73

LINE

155598

44,439,166

19.16

8.08

SINE

1100

176,409

0.08

0.03

LTR retrotransposons

221886

118,987,168

51.31

21.62

Gypsy

105335

78,656,908

33.92

14.29

Copia

27099

15,596,297

6.72

2.83

DNA transposons

185613

54,034,406

23.30

9.82

 Unclassified elements

13555

12,889,753

5.56

2.34

 Satellites

1611

412,566

0.18

0.07

 ncRNA

1332

210,855

0.09

0.04

 Total repetitive elements

582339

231,879,649

100.00

42.14

Back to article page