Table 2 Differentially expressed genes in Se-enriched B. amyloliquefaciens C-1 versus C-1. (|log2FoldChange|> 5, Padj < 0.001).
Stage | Gene ID | Description | log2FC |
|---|---|---|---|
Vegetative stage | RS04830 | Alpha/beta-type small acid-soluble spore protein | + 5.7591 |
RS15570 | Acyl-CoA dehydrogenase family | − 7.9031 | |
RS07680 | S8 family serine peptidase | − 7.4537 | |
RS03985 | Dihydrolipoyl dehydrogenase | − 7.2566 | |
RS03980 | 2-oxo acid dehydrogenase subunit E2 | − 7.0734 | |
RS15575 | Acetyl-CoA C-acetyltransferase | − 6.8428 | |
RS03975 | Transketolase, pyrimidine binding ___domain | − 6.6687 | |
RS13215 | Electron transfer flavoprotein ___domain | − 5.8396 | |
RS15580 | Enoyl-CoA hydratase/isomerase | − 5.7843 | |
RS03970 | Dehydrogenase E1 component | − 5.5615 | |
RS09735 | Glucosylceramidase | − 5.4867 | |
RS01920 | Amino acid ABC transporter substrate-binding protein | − 5.3382 | |
RS01930 | ABC transporter | − 5.1348 | |
RS09175 | 3-hydroxybutyrate dehydrogenase | − 5.1124 | |
RS01925 | Amino acid ABC transporter permease | − 5.0475 | |
Sporulation stage | RS03050 | tRNA-Asp | + 5.9988 |
RS13765 | Cation transporter | + 5.4799 | |
RS04005 | MurR/RpiR family transcriptional regulator | + 5.4426 | |
RS01675 | Hypothetical protein | − 11.3040 | |
RS03985 | Dihydrolipoyl dehydrogenase | − 8.3691 | |
RS03980 | 2-oxo acid dehydrogenase subunit E2 | − 8.2980 | |
RS03975 | Transketolase, C-terminal ___domain | − 7.8965 | |
RS03970 | Dehydrogenase E1 component | − 7.2244 | |
RS07680 | S8 family serine peptidase | − 7.0812 | |
RS15570 | Acyl-CoA dehydrogenase family protein | − 6.9295 | |
RS09155 | Non-ribosomal peptide synthetase | − 6.7826 | |
RS14995 | Bacteriocin class IId cyclical uberolysin-like | − 6.4219 | |
RS05110 | S8 family serine peptidase | − 6.3485 | |
RS09175 | 3-hydroxybutyrate dehydrogenase | − 6.2301 | |
RS11395 | SDR family NADP-dependent oxidoreductase | − 6.1285 | |
RS08890 | Pectate lyase superfamily protein | − 6.0259 | |
RS09185 | Coenzyme A transferase | − 5.9925 | |
RS15575 | Acetyl-CoA C-acetyltransferase | − 5.9870 | |
RS09160 | Non-ribosomal peptide synthetase | − 5.9227 | |
RS09180 | CoA transferase subunit B | − 5.9106 | |
RS04195 | Hypothetical protein | − 5.9089 | |
RS07505 | Cytochrome c oxidase assembly factor CtaG | − 5.8931 | |
RS08870 | Lytic polysaccharide monooxygenase | − 5.8423 | |
RS11390 | Ketoacyl-synthetase C-terminal | − 5.7588 | |
RS07500 | Cytochrome c oxidase subunit IVB | − 5.6769 | |
RS09165 | Non-ribosomal peptide synthetase | − 5.6738 | |
RS11400 | Polyketide synthase dehydratase | − 5.6150 | |
RS07495 | Cytochrome c oxidase subunit III | − 5.5882 | |
RS15935 | Zinc-dependent metalloprotease | − 5.5505 | |
RS02915 | Methyltransferase ___domain | − 5.4510 | |
RS07490 | Cytochrome c oxidase subunit I | − 5.4474 | |
RS11385 | Zinc-binding dehydrogenase | − 5.4464 | |
RS11405 | SDR family NAD(P)-dependent oxidoreductase | − 5.3735 | |
RS11410 | KR ___domain-containing protein | − 5.2908 | |
RS06245 | S9 family peptidase | − 5.1361 | |
RS06250 | PhrA family phosphatase inhibitor | − 5.1220 | |
RS09190 | GntP family permease | − 5.1065 | |
RS10215 | Hypothetical protein | − 5.0673 | |
RS02910 | NUDIX hydrolase | − 5.0636 | |
RS11380 | Cytochrome P450 | − 5.0568 |
