Table 2 Comparison of concentration data between literature and model (mmol/L) at different time points of the simulation.
Metabolite | Conc. (literature) \([\)mmol/L\(]\) | Model conc. at starting point | Model conc. during glycolysis | Model conc. during \(\beta\)-oxidation | Model conc. at the end of simulation | SD over mean |
---|---|---|---|---|---|---|
Acetyl-CoA | 0.072 | 0.070 | 0.071 | 0.060 | 0.060 | 0.002 |
Oxaloacetate | 0.002–0.00632 | 0.006 | 0.005 | 0.001 | 0.001 | 0.126 |
Citrate | 0.11433 | 0.190 | 0.184 | 0.115 | 0.110 | 0.031 |
Isocitrate cis-aconitate | 0.002–0.00635 | 0.020 | 0.017 | 0.010 | 0.009 | 0.091 |
\(\alpha\)-ketoglutarate | 0.004–0.01337 | 0.030 | 0.031 | 0.023 | 0.022 | 0.085 |
Succinyl-CoA succinate | 0.36–0.9138 | 0.730 | 0.720 | 0.691 | 0.690 | 0.011 |
Fumarate | 0.48529 | 0.485 | 0.488 | 0.490 | 0.490 | 0.012 |
Malate | 0.49536 | 0.495 | 0.495 | 0.489 | 0.488 | 0.010 |