Table 2 Total quality of RNA samples.
Variety | Samples | Raw reads | Clean reads | Error rate (%) | Q30 (%) | GC content (%) | Mapping rate (%) |
|---|---|---|---|---|---|---|---|
Wild | liver-01 | 47,591,352 | 46,883,618 | 0.0242 | 94.95 | 47.34 | 89.25 |
liver-02 | 42,841,296 | 42,310,742 | 0.024 | 95.15 | 46.34 | 94.9 | |
liver-03 | 45,328,082 | 44,666,082 | 0.0242 | 94.98 | 47.1 | 88.61 | |
Spleen-01 | 44,345,952 | 43,400,192 | 0.0247 | 94.45 | 47.05 | 93.64 | |
Spleen-02 | 45,892,792 | 43,879,064 | 0.0245 | 94.69 | 47.79 | 94.2 | |
Spleen-03 | 44,831,064 | 43,763,322 | 0.0249 | 94.31 | 44.14 | 93.33 | |
White | liver-01 | 56,849,010 | 56,092,196 | 0.0238 | 95.4 | 47.18 | 94.38 |
liver-02 | 44,598,440 | 43,999,860 | 0.0238 | 95.35 | 46.92 | 91.88 | |
liver-03 | 48,637,954 | 47,975,682 | 0.0238 | 95.38 | 46.96 | 92.27 | |
Spleen-01 | 44,674,788 | 43,748,714 | 0.0246 | 94.63 | 46.21 | 81.73 | |
Spleen-02 | 43,521,044 | 42,252,280 | 0.0243 | 94.86 | 48.42 | 76.17 | |
Spleen-03 | 44,799,814 | 43,894,616 | 0.0248 | 94.37 | 43.64 | 93.1 |
