Table 1 The detailed information of RNA sequencing.
Groups | sample | Raw reads | Clean reads | Clean bases | Error rate (%) | Q20 (%) | Q30 (%) | GC content (%) | Total mapped (%) | Uniquely mapped (%) |
|---|---|---|---|---|---|---|---|---|---|---|
Group A (0Â day) | S_latifolia0_1 | 81,673,678 | 80,341,990 | 10,981,199,997 | 0.0266 | 97.35 | 92.74 | 53.86 | 90.09 | 84.4 |
S_latifolia0_2 | 76,240,266 | 75,006,300 | 10,346,303,204 | 0.0266 | 97.34 | 92.74 | 53.36 | 88.61 | 83.3 | |
S_latifolia0_3 | 71,432,626 | 70,972,686 | 9,886,480,429 | 0.0271 | 97.12 | 92.28 | 53.58 | 90.25 | 85.38 | |
Group B (8Â day) | S_latifolia8_1 | 110,148,518 | 111,554,056 | 16,606,619,798 | 0.0251 | 97.78 | 94.22 | 51.31 | 79.08 | 60.26 |
S_latifolia8_2 | 92,131,416 | 92,630,010 | 13,775,812,603 | 0.0252 | 97.83 | 94.14 | 53.46 | 73.21 | 56.21 | |
S_latifolia8_3 | 110,305,723 | 106,147,706 | 15,594,698,808 | 0.0253 | 97.68 | 94.08 | 50.69 | 78.77 | 64.81 | |
Group C (16Â day) | S_latifolia16_1 | 119,577,055 | 110,177,462 | 15,867,147,223 | 0.0252 | 97.79 | 94.16 | 52.29 | 87.49 | 82.15 |
S_latifolia16_2 | 98,227,591 | 92,713,360 | 13,497,287,889 | 0.0251 | 97.79 | 94.3 | 50.88 | 87.24 | 82.21 | |
S_latifolia16_3 | 78,099,419 | 72,966,626 | 10,546,011,508 | 0.0261 | 97.35 | 93.32 | 52.49 | 87.74 | 82.53 | |
Group D (24Â day) | S_latifolia24_1 | 79,223,008 | 78,099,136 | 10,762,177,065 | 0.0268 | 97.27 | 92.57 | 53.16 | 75.87 | 67.59 |
S_latifolia24_2 | 74,215,258 | 73,443,512 | 10,171,642,562 | 0.027 | 97.16 | 92.35 | 53.19 | 84.95 | 71.71 | |
S_latifolia24_3 | 69,988,408 | 68,936,558 | 9,588,239,519 | 0.0269 | 97.2 | 92.43 | 53.17 | 71.2 | 57.68 |
