Table 2 Long non-coding RNAs (lncRNAs) and lncRNA target genes that are associated with postharvest senescence.

From: Long non-coding RNAs and their potential function in response to postharvest senescence of Sparassis latifolia during cold storage

Gene_id

Gene_indentification

Cis-lncRNAs

Trans-lncRNAs

EVM0012176

Formate dehydrogenase (FDH)

XLOC_002861

XLOC_006022, XLOC_009489, XLOC_004994

EVM0007108

Alcohol dehydrogenase 1 (ADH1)

 

XLOC_004491, XLOC_004655, XLOC_002861, XLOC_012207, XLOC_012886, XLOC_009326

EVM0009327

Pyruvate decarboxylase (PDC)

 

XLOC_010553, XLOC_006906, XLOC_002973

EVM0011998

catalase (CAT)

 

XLOC_008192, XLOC_007565, XLOC_010685, XLOC_009489, XLOC_006022

EVM0000573

Glutathione S-transferase 2 (GST2)

 

XLOC_005088, XLOC_007508, XLOC_013467, XLOC_006935, XLOC_010055, XLOC_010105, XLOC_006160, XLOC_002009, XLOC_011901, XLOC_013256

EVM0008918

Glycerol-3-phosphate dehydrogenase (GPDH)

 

XLOC_002379, XLOC_006022, XLOC_007904, XLOC_002704, XLOC_010685, XLOC_007565

EVM0009831

Pyruvate kinase (PK)

 

XLOC_000222

EVM0000111

Methylsterol monooxygenase (ERG25)

 

XLOC_011266, XLOC_004073, XLOC_011365, XLOC_007734, XLOC_011065, XLOC_004849, XLOC_003470, XLOC_002713, XLOC_002934, XLOC_002923, XLOC_005934, XLOC_003510, XLOC_012519, XLOC_012070, XLOC_011452, XLOC_012659, XLOC_006274, XLOC_001848, XLOC_011290, XLOC_000711, XLOC_009957, XLOC_000406, XLOC_007245, XLOC_010882, XLOC_003278, XLOC_012083, XLOC_013418, XLOC_011225, XLOC_002151

EVM0003490

Delta(24(24(1)))-sterol reductase (ERG4)

 

XLOC_002713, XLOC_004073, XLOC_003470, XLOC_012659, XLOC_011065, XLOC_005934, XLOC_002934, XLOC_007734, XLOC_011266, XLOC_012070, XLOC_004849, XLOC_003510, XLOC_000711, XLOC_006274, XLOC_011365, XLOC_002923, XLOC_012519, XLOC_011452, XLOC_010882, XLOC_000406, XLOC_013418, XLOC_001848, XLOC_003562, XLOC_002151, XLOC_011290, XLOC_004618, XLOC_009957, XLOC_009802

EVM0005394

Hydroxymethylglutaryl-CoA synthase (ERG13)

XLOC_002302

XLOC_002923, XLOC_011266, XLOC_002713, XLOC_012659, XLOC_004073, XLOC_004849, XLOC_003470, XLOC_012070, XLOC_007734, XLOC_011065, XLOC_011365, XLOC_005934, XLOC_002934, XLOC_001848, XLOC_003510

EVM0012147

Delta(7)-sterol 5(6)-desaturase (ERG3)

 

XLOC_002923, XLOC_011266, XLOC_011290, XLOC_001848, XLOC_004849, XLOC_012659, XLOC_004073, XLOC_011065, XLOC_007734, XLOC_002713, XLOC_009957, XLOC_011365

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