Table 2 Characterization of SSR loci.
From: SSR molecular marker developments and genetic diversity analysis of Zanthoxylum nitidum (Roxb.) DC
Repeat type | Repeat motif | Number | Percentage |
|---|---|---|---|
Mononucleotide | A/T | 207,789 | 79.53 |
G/C | 205 | 0.08 | |
Total | 207,994 | 79.61 | |
Dinucleotide | AC/GT | 4879 | 1.87 |
AG/CT | 7503 | 2.87 | |
AT/AT | 19,881 | 7.61 | |
CG/CG | 69 | 0.03 | |
Total | 32,332 | 12.38 | |
Trinucleotide | AAC/GTT | 1097 | 0.42 |
AAG/CTT | 3280 | 1.26 | |
AAT/ATT | 8245 | 3.16 | |
ACC/GGT | 858 | 0.33 | |
ACG/CGT | 271 | 0.10 | |
ACT/AGT | 97 | 0.04 | |
AGC/CTG | 1156 | 0.44 | |
AGG/CCT | 502 | 0.19 | |
ATC/ATG | 1667 | 0.64 | |
CCG/CGG | 464 | 0.18 | |
Total | 17,637 | 6.75 | |
Tetranucleotide | Total | 2265 | 0.87 |
Pentanucleotide | Total | 514 | 0.20 |
Hexanucleotide | Total | 525 | 0.20 |
