Table 1 Sequence identity among the coding regions of the IAV genome segments compared with those of Cal04/2009
From: Characterization of A(H1N1)pdm09 influenza viruses isolated between 2016 and 2019
Virus | Clade | Nucleotide identity with Cal04/2009 (%)* | |||||||
|---|---|---|---|---|---|---|---|---|---|
PB2 | PB1 | PA | HA | NP | NA | M | NS | ||
A/Wisconsin/588/2019 | 6B.1 A.5a | 97.19 | 97.71 | 97.39 | 95.88 | 97.46 | 96.59 | 97.75 | 96.53 |
A/Kanagawa/IC1892/2019 | 97.41 | 97.53 | 97.67 | 96.41 | 97.52 | 96.87 | 97.86 | 96.89 | |
A/Kanagawa/IC1848/2019 | 97.50 | 97.93 | 97.53 | 96.06 | 97.46 | 97.09 | 98.47 | 96.42 | |
A/Hawaii/70/2019 | 97.32 | 97.66 | 97.44 | 96.11 | 97.39 | 96.45 | 97.75 | 96.77 | |
A/Brisbane/02/2018 | 97.67 | 98.10 | 97.72 | 96.59 | 97.59 | 97.37 | 98.06 | 97.13 | |
A/Tokyo/UT-BB131/2017 | 6.B.1 | 97.63 | 98.10 | 97.81 | 96.82 | 97.52 | 97.37 | 98.47 | 97.01 |
A/Kobe/821/2017 | 97.98 | 98.19 | 98.04 | 97.17 | 97.99 | 97.65 | 98.37 | 97.01 | |
A/Kanagawa/AC1711/2017 | 97.67 | 97.88 | 97.81 | 96.76 | 97.86 | 97.44 | 98.37 | 97.13 | |
A/Yamagata/205/2016 | 97.80 | 97.97 | 98.09 | 97.41 | 98.06 | 97.80 | 98.67 | 97.25 | |
