Abstract
Background
Adjuvant gemcitabine (aGC) is still a therapeutic mainstay after resection of pancreatic ductal adenocarcinoma (PDAC), but its efficacy is impaired by gram-negative intratumoral bacteria, suggesting a potential therapeutic implication of additive antibiotics. PDAC however, contains several other bacterial strains capable of gemcitabine degradation.
Methods
Using immunohistochemistry and fluorescence-in-situ-hybridization on the samples of a large cohort of resected PDAC patients, we examined how the intratumoral bacterial abundance affected patient outcomes with respect to aGC therapy and whether the use of pre- or postoperative antibiotics (ABT) improved the prognosis. We confirmed the findings in several independent external cohorts.
Results
High intratumoral bacterial abundance impaired aGC efficacy (disease free survival (DFS) 9.4 vs 19.1 months, p < 0.001; overall survival (OS) 19.4 vs 34.0 months, p < 0.001), which was mitigated by postoperative ABT application (DFS 7.9 vs 12.4 months, p < 0.001, OS 15.2 vs 29.6 months, p < 0.001). Postoperative ABT improved outcome of patients with low bacterial abundance in their tumors (DFS 15.1 vs 34.8 months, p < 0.001, OS 28.5 vs 56.00 months, p < 0.001).
Conclusions
High intratumoral bacterial abundance may predict poor response to adjuvant gemcitabine treatment, whereas postoperative ABT improves it. We propose postoperative ABT as potential additive treatment before or during aGC therapy after PDAC resection.

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Data availability
Anonymized raw data on the study can be obtained from the corresponding author upon reasonable request.
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Acknowledgements
We thank A. Sendelhofert and A. Heier for excellent technical assistance.
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Michael Guenther: Conceptualization, data curation, formal analysis, investigation, methodology, project administration, resources, validation, visualization, and writing—review and editing. Sai Agash Surendran: Resources, software, formal analysis, methodology, investigation, validation, visualization, and writing—original draft. Nina Hauer, Florian Fahrenschon, Muhammed Dervis Arslan: Data curation, project administration, resources. Steffen Ormanns: Conceptualization, data curation, formal analysis, investigation, methodology, project administration, resources, supervision, validation, visualization, and writing—original draft, review & editing. The work reported in the article has been performed by the authors, unless clearly specified in the text. All authors reviewed and approved the final version of the article.
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Due to the observation period of our study (2000–2016) and the poor prognosis of the disease, patient informed consent could not be obtained. Considering these circumstances, the ethics committee of the medical faculty of Ludwig-Maximilians-University approved the use of anonymized patient data without obtaining the patients’ informed consent (project 20-081), and the study was carried out according to the Declaration of Helsinki.
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Guenther, M., Surendran, S.A., Hauer, N. et al. Intratumoral bacterial abundance confers poor response to adjuvant gemcitabine in resected pancreatic cancer patients which is mitigated by postoperative antibiotics. Br J Cancer (2025). https://doi.org/10.1038/s41416-025-03078-2
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DOI: https://doi.org/10.1038/s41416-025-03078-2