Fig. 3: Gene expression in the mammalian craniofacial complex at single-cell resolution.
From: Dynamic enhancer landscapes in human craniofacial development
a Uniform Manifold Approximation and Projection (UMAP) clustering, color-coded by inferred cell types across clusters from aggregated scRNA-seq for the developing mouse face at embryonic days 11.5–13.5, for 57,598 cells across all stages. Cartoon shows the outline of dissected region from the mouse embryonic face at e11.5, corresponding regions were excised at other stages. b Same UMAP clustering, color-coded by main cell lineages. c Expression of select marker genes in cell types shown a. See Supplementary Fig. 11 for additional details. d UMAP plots comprising cells with >1.5-fold gene expression for marker genes representing specific cell types as shown in a and c. Source data are provided as a publicly accessible Seurat/R object file, see Data Availability Statement for details.
