Extended Data Fig. 10: Structural similarity between the experientially determined and AlphaFold2 predicted structures of GalS1. | Nature Plants

Extended Data Fig. 10: Structural similarity between the experientially determined and AlphaFold2 predicted structures of GalS1.

From: Structural and biochemical insight into a modular β-1,4-galactan synthase in plants

Extended Data Fig. 10

a, Comparison of the X-ray structure of Populus trichocarpa GalS1 (97-495 residues; current study) determined in this work (in magenta) and the computationally predicted AlphaFold2 structure downloaded from the AlphaFold Protein Structure Database (AlphaFold id O22807;96,97 in green) of Arabidopsis thaliana GalS1 (97-496 residues). The root-mean-square deviation (RMSD; using Cα) of the aligned structures is 0.610 Å. b, Comparison of the X-ray structure of Populus trichocarpa GalS1 (97-495 residues; current study) determined in this work (in magenta) with the predicted AlphaFold2 structure of Populus trichocarpa GalS1 (97-495 residues) carried out in house using ColabFold98 (blue). The root-mean-square deviation (RMSD; using Cα) of the aligned structures is 0.593 Å.

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