Fig. 2: Thalamic, striatopallidal and midbrain dopaminergic structures of the WHS rat brain atlas.
From: Waxholm Space atlas of the rat brain: a 3D atlas supporting data analysis and integration
a, A sagittal view of the detailed annotations of striatopallidal and midbrain dopaminergic regions. Right: a magnified 3D rendering of the same cut to show the details of the annotations. b, A coronal view of the thalamic subdivisions. Right: a magnified 3D rendering of the thalamus using the same cut. GPe-m, Globus pallidus external, medial part; GPe-l, Globus pallidus external, lateral part; EP, Entopeduncular nucleus; VP, Ventral pallidum; CPu, Caudate putamen; NAc-c, Nucleus accumbens, core; NAc-sh, Nucleus accumbens, shell; VSR-u, Ventral striatal region, unspecified; STh, Subthalamic nucleus; SN-r, Substantia nigra, reticular part; SN-c, Substantia nigra, compact part; eml-u, external medullary lamina, unspecified; eml-ar, external medullary lamina, auditory radiation; sm, stria medullaris thalami; st, stria terminalis; RT-u, Reticular (pre)thalamic nucleus, unspecified; RT-a, Reticular (pre)thalamic nucleus, auditory segment; ZI-d, Zona incerta, dorsal part; ZI-v, Zona incerta, ventral part; ZI-A11, Zona incerta, A11 dopamine cells; mtg, mammillotegmental tract; SMT, Submedius thalamic nucleus; Rh, Rhomboid thalamic nucleus; Re, Reuniens thalamic nucleus; CM, Central medial thalamic nucleus; CL, Central lateral thalamic nucleus; IMD, Intermediodorsal thalamic nucleus; MD-m, Mediodorsal thalamic nucleus, medial part; PCN, Paracentral thalamic nucleus; MD-l, Mediodorsal thalamic nucleus, lateral part; MD-c, Mediodorsal thalamic nucleus, central part; DLG, Dorsal lateral geniculate nucleus; LHb, Lateral habenular nucleus; MHb, Medial habenular nucleus; PV, Paraventricular thalamic nuclei (anterior and posterior); LP-mr, Lateral posterior thalamic nucleus, mediorostral part; LD-vl, Laterodorsal thalamic nucleus, ventrolateral part; Po, Posterior thalamic nucleus; VPM, Ventral posteromedial thalamic nucleus; VPL, Ventral posterolateral thalamic nucleus; VM, Ventromedial thalamic nucleus; VL, Ventrolateral thalamic nucleus.
