Table 1 Cryo-EM and refinement statistics

From: KIF1C activates and extends dynein movement through the FHF cargo adapter

 

FH571–718F

FH571–718F

FH451–718F + KIF1CS674–822

FH451–718F + KIF1CS674–922

FH451–718F + KIF1CS674–922

Electron Microscopy Data Bank ID

18302

18303

—

—

Protein Data Bank ID

8QAT

—

—

—

Data collection and processing

     

Magnification

81,000×

75,000×

81,000×

81,000×

81,000×

Voltage

300

300

300

300

300

Pixel size (Ã…)

1.059

1.09

1.059

1.059

1.059

Electron exposure (e− Å−2)

44

34

44

43

54

Defocus range (μm)

1.6–2.6

1.6–2.6

1.6–2.6

1.3–2.7

1.3–2.7

Initial movies

26,383

16,446

11,839

5,726

7,424

Initial particle images

902,151

1,605,779

2,368,723

1,297,609

952,300

Final particle images

273,204

507,489

—

Symmetry imposed

C1

C1

C1

C1

C1

Map resolution (Ã…)

3.2a

4.8b

Fourier shell correlation threshold

0.143a

0.143b

Map-sharpening B factor (Ã…2)

−116.705a

−10b

Model refinement

     

Model resolution (Ã…)

3.52a

—

—

Fourier shell correlation threshold

0.5a

—

—

Model composition

     

Nonhydrogen atoms

7,758a

—

—

Protein residues

970a

—

—

Ligands

—

—

—

Mean B factors (Ã…2)

     

Protein

100.08a

—

—

Ligand

—

—

—

Root mean square deviations

     

Bond lengths (Ã…)

0.006a

—

—

Bond angles

1.267°a

—

—

Validation

     

Clash score

3.47a

—

—

MolProbity score

1.14a

—

—

Rotamers outliers (%)

0.35a

—

—

Ramachandran plot

     

Favored (%)

98.01a

—

—

Allowed (%)

1.89a

—

—

Outliers (%)

0.1a

—

—

  1. aValue obtained from three merged datasets. bValue obtained from two merged datasets.