Table 3 Summary of the assembly.

From: De novo assembly of the Platycladus orientalis (L.) Franco transcriptome provides insight into the development and pollination mechanism of female cone based on RNA-Seq data

 

Unigenes

Transcripts

Number of sequences

71,669

128,747

Number of assembled bases (bp)

65,101,159

154,393,277

Percent GC

40.09

40.36

Largest transcript (bp)

16,379

16,379

Smallest transcript (bp)

201

201

Average length (bp)

908.36

1,199.20

N50 (bp)

1,621

1,971

  1. The N50 represents the median of the contig-size that is the last contig length when the additive length reaches half of the total contig-size after sorting the contigs by size.
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