Table 1 Differentially expressed (DE) genes in the six datasets.

From: Cell type specific transcriptional reprogramming of maize leaves during Ustilago maydis induced tumor formation

Comparison - Dataset

DE genes fulla

DE genes uniqueb

MBS.vs.HPT

8 195

4 553

MMS.vs.HTT

8 356

3 946

MMS.vs.seeTC

764

101

seeTC.vs.HTT

1 803

452

HPT.vs.HTT

77

6

  1. aDE genes full contain all genes after applying a threshold of |log2FC| ≥ 1.5.
  2. bDE genes unique indicates the number of DE genes (|log2FC| ≥ 1.5) that are exclusive for the corresponding dataset.
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