Table 6 the haplotype-traits association analysis.

From: Genomic prediction for growth using a low-density SNP panel in dromedary camels

Trait

Haplotype

NSNP*

NSIG

ISIG

EMP1

SNPS

Birth Weight

Haplotype1

2

0

0

1

NaN**

Haplotype2

2

2

1

1.00E-04

S8_72594549

Haplotype3

2

2

1

0.0121

S9_53275650

Haplotype4

6

4

1

0.0413

S10_13608620

Haplotype5

2

2

1

0.0243

S11_72356401

Haplotype6

2

0

0

1

NaN

Haplotype7

2

0

0

1

NaN

Haplotype8

4

0

0

1

NaN

Haplotype9

2

2

1

4.00E-04

S19_10237661

Haplotype10

2

0

0

1

NaN

Haplotype11

2

0

0

1

NaN

Haplotype12

2

2

1

0.009299

SX_78141514

Gain/day

Haplotype1

2

0

0

1

NaN

Haplotype2

2

0

0

1

NaN

Haplotype3

2

0

0

1

NaN

Haplotype4

6

0

0

1

NaN

Haplotype5

2

0

0

1

NaN

Haplotype6

2

2

1

2.00E-04

S14_30865085

Haplotype7

2

1

1

0.0391

S14_31241643

Haplotype8

4

1

1

0.05859

S14_31371259

Haplotype9

2

0

0

1

NaN

Haplotype10

2

0

0

1

NaN

Haplotype11

2

0

0

1

NaN

Haplotype12

2

2

1

0.0011

SX_78141514

Body weight

Haplotype1

2

0

0

1

NaN

Haplotype2

2

2

1

1.00E-04

S8_72594549

Haplotype3

2

2

1

0.0128

S9_53275637

Haplotype4

6

0

0

1

NaN

Haplotype5

2

2

1

0.007299

S11_72356401

Haplotype6

2

2

1

0.006499

S14_30865111

Haplotype7

2

2

1

0.0203

S14_31241643

Haplotype8

4

4

1

0.0395

S14_31371259

Haplotype9

2

2

1

0.0034

S19_10237661

Haplotype10

2

0

0

1

NaN

Haplotype11

2

2

1

0.005999

S25_263086

Haplotype12

2

2

1

0.038

SX_78141514

  1. * NSNP: Number of SNPs in Haplotype, NSIG: Total number of SNPs below p-value threshold (p < 0.05)), ISIG: Number of significant SNPs also passing LD-criterion (R-squared > 0.50), EMP1: Empirical set-based p-value, SNPS: List of SNPs in the Haplotype.
  2. ** Not a Number.
Back to article page