Table 3 The number of SNP effects with different type and region.
Type and region | Counts | Percent (%) |
|---|---|---|
Upstream gene variant | 761 | 59.9 |
Synonymous variant | 260 | 20.5 |
Missense variant | 242 | 19.0 |
Splice region variant and stop retained variant | 1 | 0.1 |
Splice region variant and intron variant | 3 | 0.2 |
Downstream gene variant | 1 | 0.1 |
Stop gained | 2 | 0.2 |
Stop lost and splice region variant | 1 | 0.1 |
