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Showing 1–50 of 66 results
Advanced filters: Author: Chris Ritchie Clear advanced filters
  • The Global Flourishing Study provides a comprehensive view of the distribution and determinants of well-being by assessing domains such as health, happiness, meaning, character, relationships and financial security. Initial findings reveal significant variations in flourishing across countries and demographic groups, with factors such as age, marital status and religious service attendance showing strong associations with well-being.

    • Tyler J. VanderWeele
    • Byron R. Johnson
    • George Yancey
    ResearchOpen Access
    Nature Mental Health
    Volume: 3, P: 636-653
  • Whole-genome sequencing, transcriptome-wide association and fine-mapping analyses in over 7,000 individuals with critical COVID-19 are used to identify 16 independent variants that are associated with severe illness in COVID-19.

    • Athanasios Kousathanas
    • Erola Pairo-Castineira
    • J. Kenneth Baillie
    ResearchOpen Access
    Nature
    Volume: 607, P: 97-103
  • Data collected from more than 2,000 taxa provide an unparalleled opportunity to quantify how extreme wildfires affect biodiversity, revealing that the largest effects on plants and animals were in areas with frequent or recent past fires and within extensively burnt areas.

    • Don A. Driscoll
    • Kristina J. Macdonald
    • Ryan D. Phillips
    ResearchOpen Access
    Nature
    Volume: 635, P: 898-905
  • A global network of researchers was formed to investigate the role of human genetics in SARS-CoV-2 infection and COVID-19 severity; this paper reports 13 genome-wide significant loci and potentially actionable mechanisms in response to infection.

    • Mari E. K. Niemi
    • Juha Karjalainen
    • Chloe Donohue
    ResearchOpen Access
    Nature
    Volume: 600, P: 472-477
  • Isolated populations may empower genetic association studies of complex traits. Here, the authors identify a rare cardioprotective APOC3variant in a Greek population isolate and highlight the value of using population isolates to detect rare variants that confer disease risk.

    • Ioanna Tachmazidou
    • George Dedoussis
    • Eleftheria Zeggini
    ResearchOpen Access
    Nature Communications
    Volume: 4, P: 1-6
  • Ongoing global warming is likely to cause tipping point thresholds to be passed, but an abrupt system change can still be avoided if the warming is reversed quickly relative to the timescale of the tipping element.

    • Paul D. L. Ritchie
    • Joseph J. Clarke
    • Chris Huntingford
    Reviews
    Nature
    Volume: 592, P: 517-523
  • Adding low concentrations of aromatic organic cations to an aqueous solution in which polyoxometalate-based crystals are immersed leads to the spontaneous growth of tubular structures with controllable diameters. Tubes can be fused together to form junctions and are shown to act as channels through which liquids can flow.

    • Chris Ritchie
    • Geoffrey J. T. Cooper
    • Leroy Cronin
    Research
    Nature Chemistry
    Volume: 1, P: 47-52
  • Collapse of the Atlantic Meridional Overturning Circulation (AMOC) will impact agricultural land use and its economic value in Great Britain. Ritchie et al. model the impacts of smooth (conventional climate change) and abrupt (tipping point change) AMOC collapse on land use, arable farming and related economic outputs in Britain, as well as the economic feasibility of technological adaptations such as widespread irrigation.

    • Paul D. L. Ritchie
    • Greg S. Smith
    • Ian J. Bateman
    Research
    Nature Food
    Volume: 1, P: 76-83
  • This report from the 1000 Genomes Project describes the genomes of 1,092 individuals from 14 human populations, providing a resource for common and low-frequency variant analysis in individuals from diverse populations; hundreds of rare non-coding variants at conserved sites, such as motif-disrupting changes in transcription-factor-binding sites, can be found in each individual.

    • Gil A. McVean
    • David M. Altshuler (Co-Chair)
    • Gil A. McVean
    ResearchOpen Access
    Nature
    Volume: 491, P: 56-65
  • Adoptive T-cell immunotherapy offers promise to patients who are resistant to standard anti-viral strategies. Here the authors describe clinical observations in patients with viral complications treated with adoptive immunotherapy over the last 15 years.

    • Michelle A. Neller
    • George R. Ambalathingal
    • Rajiv Khanna
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-12
  • A collision over genes and the pursuit of happiness has attracted a large number of onlookers online.

    • Chris Woolston
    Research Highlights
    Nature
  • A large genome-wide association study of more than 5 million individuals reveals that 12,111 single-nucleotide polymorphisms account for nearly all the heritability of height attributable to common genetic variants.

    • Loïc Yengo
    • Sailaja Vedantam
    • Joel N. Hirschhorn
    ResearchOpen Access
    Nature
    Volume: 610, P: 704-712
  • Results for the final phase of the 1000 Genomes Project are presented including whole-genome sequencing, targeted exome sequencing, and genotyping on high-density SNP arrays for 2,504 individuals across 26 populations, providing a global reference data set to support biomedical genetics.

    • Adam Auton
    • Gonçalo R. Abecasis
    • Gonçalo R. Abecasis
    ResearchOpen Access
    Nature
    Volume: 526, P: 68-74
  • Large genome-wide meta-analysis of clinically diagnosed late-onset Alzheimer’s disease (LOAD) from 94,437 individuals identifies new LOAD risk loci and implicates Aβ formation, tau protein binding, immune response and lipid metabolism.

    • Brian W. Kunkle
    • Benjamin Grenier-Boley
    • Margaret A. Pericak-Vance
    Research
    Nature Genetics
    Volume: 51, P: 414-430
  • In this non-comparative trial, patients with BRAFV600-mutant resectable melanoma received either pembrolizumab alone, a sequential combination of pembrolizumab, dabrafenib and trametinib, or a concurrent combination thereof, showing encouraging clinical response rates in the concurrent therapy arm and awaiting longer follow-up.

    • Georgina V. Long
    • Matteo S. Carlino
    • Alexander M. Menzies
    ResearchOpen Access
    Nature Medicine
    Volume: 30, P: 2540-2548
  • Here, Simpson et al. analyze data from 3.6 million COVID-19 vaccine second doses (ChAdOx1 and BNT162b2) in Scotland for risk of thrombocytopenic, thromboembolic and hemorrhagic events. Borderline increased risks of immune thrombocytopenic purpura and cerebral venous sinus thrombosis were found for the ChAdOx1 vaccine. These events were rare and usually short-lived.

    • Colin R. Simpson
    • Steven Kerr
    • Aziz Sheikh
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-7
  • Timothy Frayling, Joel Hirschhorn, Peter Visscher and colleagues report a meta-analysis of genome-wide association studies for adult height in 253,288 individuals. They identify 697 variants in 423 loci significantly associated with adult height and find that these variants cluster in pathways involved in growth and together explain one-fifth of the heritability for this trait.

    • Andrew R Wood
    • Tonu Esko
    • Timothy M Frayling
    Research
    Nature Genetics
    Volume: 46, P: 1173-1186
  • 1000 Genomes imputation can increase the power of genome-wide association studies to detect genetic variants associated with human traits and diseases. Here, the authors develop a method to integrate and analyse low-coverage sequence data and SNP array data, and show that it improves imputation performance.

    • Olivier Delaneau
    • Jonathan Marchini
    • Leena Peltonenz
    Research
    Nature Communications
    Volume: 5, P: 1-9
  • Glycolytic enzymes are challenging drug targets due to their highly conserved active sites and phosphorylated substrates. Here, the authors identify fast acting allosteric inhibitors of Trypanosoma brucei phosphofructokinase that block trypanosome glycolysis and provide cure evidence in murine model.

    • Iain W. McNae
    • James Kinkead
    • Malcolm D. Walkinshaw
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-10
  • Drug target Mendelian randomization (MR) uses genetic variation in or near a gene encoding a drug target to anticipate the effect of drug action on the same target. Using drug target MR, the authors prioritized 30 targets that might elicit beneficial effects in the prevention or treatment of coronary heart disease.

    • María Gordillo-Marañón
    • Magdalena Zwierzyna
    • Chris Finan
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-12
  • The African Genome Variation Project contains the whole-genome sequences of 320 individuals and dense genotypes on 1,481 individuals from sub-Saharan Africa; it enables the design and interpretation of genomic studies, with implications for finding disease loci and clues to human origins.

    • Deepti Gurdasani
    • Tommy Carstensen
    • Manjinder S. Sandhu
    ResearchOpen Access
    Nature
    Volume: 517, P: 327-332
  • Top predators can reduce local mesopredator abundance either through direct predation or behavioural changes. Here, Newsome and colleagues demonstrate at a landscape scale across three continents that mesopredator populations are suppressed at the core, but less so on the periphery, of top predators’ ranges.

    • Thomas M. Newsome
    • Aaron C. Greenville
    • Aaron J. Wirsing
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-7
  • Genome-wide association meta-analyses of waist-to-hip ratio adjusted for body mass index in more than 224,000 individuals identify 49 loci, 33 of which are new and many showing significant sexual dimorphism with a stronger effect in women; pathway analyses implicate adipogenesis, angiogenesis, transcriptional regulation and insulin resistance as processes affecting fat distribution.

    • Dmitry Shungin
    • Thomas W. Winkler
    • Karen L Mohlke
    Research
    Nature
    Volume: 518, P: 187-196
  • A genome-wide association study and Metabochip meta-analysis of body mass index (BMI) detects 97 BMI-associated loci, of which 56 were novel, and many loci have effects on other metabolic phenotypes; pathway analyses implicate the central nervous system in obesity susceptibility and new pathways such as those related to synaptic function, energy metabolism, lipid biology and adipogenesis.

    • Adam E. Locke
    • Bratati Kahali
    • Elizabeth K. Speliotes
    Research
    Nature
    Volume: 518, P: 197-206
  • Isolated populations often have special genetic compositions that can be leveraged for genetic association studies. Here, Xue and colleagues generate and analyse 3,059 low-depth whole-genome sequences from eight European isolated populations and two matched general populations.

    • Yali Xue
    • Massimo Mezzavilla
    • Eleftheria Zeggini
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-7
  • Isolated populations can increase power to detect low frequency and rare risk variants associated with complex phenotypes. Here, the authors identify variants associated with haematological traits in two isolated Greek populations that would be difficult to detect in the general population, due to their low frequency.

    • Kalliope Panoutsopoulou
    • Konstantinos Hatzikotoulas
    • Eleftheria Zeggini
    ResearchOpen Access
    Nature Communications
    Volume: 5, P: 1-11
  • Severe congenital development defects such as Jeune syndrome can result from the malfunction of primary cilia and dynein. Here Schmidts et al. report unique biallelic null mutations in a gene encoding a dynein light chain, helping to explain the nature of ciliopathies in human patients.

    • Miriam Schmidts
    • Yuqing Hou
    • Hou-Feng Zheng
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-14
  • Levels of circulating thyrotropin and free thyroxine reflect thyroid function, however, their genetic underpinnings remain poorly understood. Taylor et al. take advantage of whole-genome sequence data from cohorts within the UK10K project to identify novel variants associated with these traits.

    • Peter N. Taylor
    • Eleonora Porcu
    • Pingbo Zhang
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-11
  • Imputation uses genotype information from SNP arrays to infer the genotypes of missing markers. Here, the authors show that an imputation reference panel derived from whole-genome sequencing of 3,781 samples from the UK10K project improves the imputation accuracy and coverage of low frequency variants compared to existing methods.

    • Jie Huang
    • Bryan Howie
    • Nicole Soranzo
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-9
  • Population-based genome sequencing provides an increasingly rich resource for the identification of low-frequency, large effect variants associated with clinically important phenotypes. Timpson et al. use UK10K data to identify a variant of the APOC3gene strongly associated with plasma triglyceride levels.

    • Nicholas J. Timpson
    • Klaudia Walter
    • Hou-Feng Zheng
    ResearchOpen Access
    Nature Communications
    Volume: 5, P: 1-11
  • Current understanding of Long COVID is limited, in part, due to lack of evidence from population-representative studies. Here, the authors analyse data from ten UK population-based studies and electronic health records, and find wide variation in the frequency of Long COVID between studies but some consistent risk factors.

    • Ellen J. Thompson
    • Dylan M. Williams
    • Claire J. Steves
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-11
  • Chris Tyler-Smith, Carlos Bustamante and colleagues report an analysis of 1,244 human Y chromosomes from the 1000 Genomes Project. They find that copy number variants have a higher predicted functional impact than other variant classes and infer bursts of male population expansion corresponding to historical periods of migration and technological innovations.

    • G David Poznik
    • Yali Xue
    • Chris Tyler-Smith
    Research
    Nature Genetics
    Volume: 48, P: 593-599
  • Sven van der Lee, Julie Williams, Gerard Schellenberg and colleagues identify rare coding variants in PLCG2, ABI3 and TREM2 associated with Alzheimer's disease. These genes are highly expressed in microglia and provide additional evidence that the microglia-mediated immune response contributes to the development of Alzheimer's disease.

    • Rebecca Sims
    • Sven J van der Lee
    • Gerard D Schellenberg
    Research
    Nature Genetics
    Volume: 49, P: 1373-1384
  • Size and shape of the brain are, among others, influenced by the dimensions of the skull. Here, the authors report genome-wide association studies for head circumference and intracranial volume in children and adults and the identification of nine common or low-frequency variants associated with these traits.

    • Simon Haworth
    • Chin Yang Shapland
    • Beate St Pourcain
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-16
  • Outcomes of patients with high-risk, localized renal cancer depend on optimal patient stratification, surgical management, and systemic therapy selection. Blick et al. discuss the current knowledge on these topics and provide an overview of interventions that are currently being investigated in clinical trials.

    • Chris Blick
    • Alastair W. S. Ritchie
    • Grant D. Stewart
    Comments & Opinion
    Nature Reviews Urology
    Volume: 14, P: 753-759
  • An international consortium reports the genomic sequence for ten Drosophila species, and compares them to two other previously published Drosophila species. These data are invaluable for drawing evolutionary conclusions across an entire phylogeny of species at once.

    • Andrew G. Clark
    • Michael B. Eisen
    • Iain MacCallum
    Research
    Nature
    Volume: 450, P: 203-218
  • Low read depth sequencing of whole genomes and high read depth exomes of nearly 10,000 extensively phenotyped individuals are combined to help characterize novel sequence variants, generate a highly accurate imputation reference panel and identify novel alleles associated with lipid-related traits; in addition to describing population structure and providing functional annotation of rare and low-frequency variants the authors use the data to estimate the benefits of sequencing for association studies.

    • Klaudia Walter
    • Josine L. Min
    • Weihua Zhang
    ResearchOpen Access
    Nature
    Volume: 526, P: 82-90
  • Subtypes of cancer associated fibroblasts can both promote and suppress tumorigenesis. Here, the authors investigate how p53 status in pancreatic cancer cells affects their interaction with cancer associated fibroblasts, and report perlecan as a mediator of the pro-metastatic environment.

    • Claire Vennin
    • Pauline Mélénec
    • Paul Timpson
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-22