Nature Search

Author Correction: Alignment of brain embeddings and artificial contextual embeddings in natural language points to common geometric patterns

Ariel Goldstein
Avigail Grinstein-Dabush
Uri Hasson
Amendments and CorrectionsOpen Access01 Oct 2024
Nature Communications

Volume: 15, P: 1
Enhancing prosthetic vision by upgrade of a subretinal photovoltaic implant in situ

Restoration of sight by subretinal photovoltaic prosthesis could be improved with next generation devices with smaller pixels. Here, the authors demonstrate safe removal and replacement of implants in rats, retinal integrity preservation and improved grating acuity with 22 μm pixel devices.

Mohajeet B. Bhuckory
Nicharee Monkongpitukkul
Daniel Palanker
ResearchOpen Access22 Mar 2025
Nature Communications

Volume: 16, P: 1-13
The cellular and molecular cardiac tissue responses in human inflammatory cardiomyopathies after SARS-CoV-2 infection and COVID-19 vaccination

Maatz, Lindberg et al. identify molecular alterations and immune response changes in endomyocardial biopsies from patients with myocarditis after COVID-19 infection, after anti-COVID-19 vaccination or from non-COVID-related causes.

Henrike Maatz
Eric L. Lindberg
Carsten Tschöpe
ResearchOpen Access24 Feb 2025
Nature Cardiovascular Research

Volume: 4, P: 330-345
Efficient in vivo genome editing prevents hypertrophic cardiomyopathy in mice

Two approaches using an adenine base editor and a Cas9 nuclease prevented the development of hypertrophic cardiomyopathy in mice carrying a pathogenic mutation on the Myh6 gene, highlighting the potential of single-dose genetic therapies for the treatment of cardiac disease.

Daniel Reichart
Gregory A. Newby
Christine Seidman
ResearchOpen Access16 Feb 2023
Nature Medicine

Volume: 29, P: 412-421
An in vitro model of neuronal ensembles

Advances in 3D neuronal cultures have allowed unprecedented access to the mechanisms underlying brain diseases. This work describes the novel Modular Neuronal Network (MoNNet) system, which enables more complex studies of cortical neuronal ensemble dynamics.

M. Angeles Rabadan
Estanislao Daniel De La Cruz
Raju Tomer
ResearchOpen Access09 Jun 2022
Nature Communications

Volume: 13, P: 1-17
Cells of the adult human heart

Single-cell and single-nucleus RNA sequencing are used to construct a cellular atlas of the human heart that will aid further research into cardiac physiology and disease.

Monika Litviňuková
Carlos Talavera-López
Sarah A. Teichmann
ResearchOpen Access24 Sept 2020
Nature

Volume: 588, P: 466-472
LIANA+ provides an all-in-one framework for cell–cell communication inference

Dimitrov et al. present LIANA+, a framework that unifies and extends approaches to study inter- and intracellular signalling from diverse mediators, captured from single-cell, spatially resolved and multi-omics data.

Daniel Dimitrov
Philipp Sven Lars Schäfer
Julio Saez-Rodriguez
ResearchOpen Access02 Sept 2024
Nature Cell Biology

Volume: 26, P: 1613-1622
Alignment of brain embeddings and artificial contextual embeddings in natural language points to common geometric patterns

Here, using neural activity patterns in the inferior frontal gyrus and large language modeling embeddings, the authors provide evidence for a common neural code for language processing.

Ariel Goldstein
Avigail Grinstein-Dabush
Uri Hasson
ResearchOpen Access30 Mar 2024
Nature Communications

Volume: 15, P: 1-12
Infant-phase reddening by surface Fe-peak elements in a normal type Ia supernova

Very early observations of a type Ia supernova—from within one hour of explosion—show a red colour that develops and rapidly disappears. These data provide information on the initial explosion mechanism: surface nuclear burning on the white dwarf or extreme mixing of the nuclear burning process.

Yuan Qi Ni
Dae-Sik Moon
Sheng Yang
Research17 Feb 2022
Nature Astronomy

Volume: 6, P: 568-576
Shared computational principles for language processing in humans and deep language models

Deep language models have revolutionized natural language processing. The paper discovers three computational principles shared between deep language models and the human brain, which can transform our understanding of the neural basis of language.

Ariel Goldstein
Zaid Zada
Uri Hasson
ResearchOpen Access07 Mar 2022
Nature Neuroscience

Volume: 25, P: 369-380
Unraveling the functional dark matter through global metagenomics

A computational approach to generate reference-free protein families from the sequence space in metagenomes reveals an enormously diverse functional space.

Georgios A. Pavlopoulos
Fotis A. Baltoumas
Nikos C. Kyrpides
ResearchOpen Access11 Oct 2023
Nature

Volume: 622, P: 594-602
Spatiotemporal immune atlas of a clinical-grade gene-edited pig-to-human kidney xenotransplant

Xenotransplantation in humans using pig organs could improve the transplant organ supply. Here the authors transplant pig kidneys into a brain-dead recipient and monitor the human immune cell response early after transplantation using spatial and single cell transcriptomics and show early myeloid cell infiltration.

Matthew D. Cheung
Rebecca Asiimwe
Paige M. Porrett
ResearchOpen Access11 Apr 2024
Nature Communications

Volume: 15, P: 1-15
MRTF-A controls vessel growth and maturation by increasing the expression of CCN1 and CCN2

Myocardin-related transcription factors (MRTFs) increase muscle growth and regeneration. Here, Hinkel et al. show that MRTFs also promote microvessel growth and maturation in chronic ischaemic disease of the heart or peripheral muscle by increasing the expression of the pro-angiongenic factors, CCN1 and CCN2.

Rabea Hinkel
Teresa Trenkwalder
Christian Kupatt
Research09 Jun 2014
Nature Communications

Volume: 5, P: 1-10
Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics

An integrated analysis of over 100 single-cell and single-nucleus transcriptomics studies illustrates severe acute respiratory syndrome coronavirus 2 viral entry gene coexpression patterns across different human tissues, and shows association of age, smoking status and sex with viral entry gene expression in respiratory cell populations.

Christoph Muus
Malte D. Luecken
Xiaohui Zhang
Research02 Mar 2021
Nature Medicine

Volume: 27, P: 546-559
SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes

An analysis of single-cell transcriptomics datasets from different tissues shows that ACE2 and TMPRSS2 are co-expressed in respiratory, corneal and intestinal epithelial cell populations, and that respiratory expression of ACE2 is associated with genes involved in innate immunity.

Waradon Sungnak
Ni Huang
Francisco Figueiredo
Research23 Apr 2020
Nature Medicine

Volume: 26, P: 681-687
High resolution structural evidence suggests the Sarcoplasmic Reticulum forms microdomains with Acidic Stores (lysosomes) in the heart

Daniel Aston
Rebecca A. Capel
Derek A. Terrar
ResearchOpen Access17 Jan 2017
Scientific Reports

Volume: 7, P: 1-15
Honeycomb-shaped electro-neural interface enables cellular-scale pixels in subretinal prosthesis

Thomas Flores
Tiffany Huang
Daniel Palanker
ResearchOpen Access23 Jul 2019
Scientific Reports

Volume: 9, P: 1-12

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