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Showing 1–9 of 9 results
Advanced filters: Author: Silvi Rouskin Clear advanced filters
  • Telomerase assembles on a multi-___domain RNA scaffold that must adopt a specific structure to function. Here, the authors reveal an alternative RNA conformation in living cells that disrupts telomerase activity, suggesting RNA misfolding may challenge proper telomerase assembly.

    • Nicholas M. Forino
    • Jia Zheng Woo
    • Michael D. Stone
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • Lan et al. report RNA structure ensembles across the entire SARSCoV-2 genome in infected human cells at single nucleotide resolution. They find alternative RNA conformations critical for promoting near-native frameshifting rates in ORF1ab.

    • Tammy C. T. Lan
    • Matty F. Allan
    • Silvi Rouskin
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-14
  • Hybrid nucleic acid origami has potential for biomedical delivery of mRNA and fabrication of artificial ribozymes. Here, the authors use chemical footprinting and cryo-electron microscopy to reveal insights into nucleic acid origami used to fold messenger and ribosomal RNA into 3D polyhedral structures.

    • Molly F. Parsons
    • Matthew F. Allan
    • Mark Bathe
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-14
  • DMS-MaPseq enables genome-wide and target-specific RNA secondary structure probing of even rare or heterogeneously structured RNAs in vivo and was used to study structure involved in translation regulation as well as nascent transcripts.

    • Meghan Zubradt
    • Paromita Gupta
    • Silvi Rouskin
    Research
    Nature Methods
    Volume: 14, P: 75-82
  • Despite approved vaccines and anti-virals to prevent and treat SARS-CoV-2 infection, there is a need for further development of efficient antiviral therapeutic strategy. Here, Zhu et al. develop locked nucleic acid antisense oligonucleotides (LNA ASOs) targeting the 5’ leader sequence of SARS-CoV-2 RNA to interfere with replication of wildtype virus and variants of concern. Daily intranasal administration in K18-hACE2 humanized mice suppresses viral infection in lung.

    • Chi Zhu
    • Justin Y. Lee
    • Anders M. Näär
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-13
  • Dimethyl sulfate mutational profiling with sequencing, combined with the newly developed DREEM algorithm, reveals that heterogeneity of RNA structure in HIV-1 regulates the use of splice sites and expression of viral genes.

    • Phillip J. Tomezsko
    • Vincent D. A. Corbin
    • Silvi Rouskin
    Research
    Nature
    Volume: 582, P: 438-442
  • Understanding how RNA structure influences its function has been hampered by a lack of approaches that can accurately quantify RNA structure in vivo; here, RNA structure is revealed on a global scale and with nucleotide-level resolution, showing that there is less structure within cells than expected from in vitro and in silico analyses.

    • Silvi Rouskin
    • Meghan Zubradt
    • Jonathan S. Weissman
    Research
    Nature
    Volume: 505, P: 701-705