Extended Data Fig. 5: Evaluation of CellLENS performance stability on adjacent CODEX tonsil sections: correspondence of CellLENS clusters identified individually on two sections.

CODEX tonsil tissue from two adjacent sections52 were used to evaluate the robustness of CellLENS performance. Shown here are Leiden clustering results (resolution = 1) based on CellLENS embeddings. In each of the three columns, left are clusters identified from CellLENS embedding of slide 1, and right are corresponding clusters in slide 2 aligned to their counterparts in slide 1.