Table 4 Repetitive sequences in the genome of Cirrhinus molitorella.
Type | Number | Length | % of the genome | |
|---|---|---|---|---|
Transposable elements | LINE | 262,778 | 44,815,284 | 4.34 |
SINE | 56,957 | 5,655,656 | 0.55 | |
LTR | 287,437 | 57,357,174 | 5.55 | |
DNA | 2,467,311 | 303,517,604 | 29.37 | |
RC | 67,577 | 12,612,186 | 1.22 | |
MITE | 201,181 | 42,891,193 | 4.15 | |
Total | 3,343,241 | 466,849,097 | 45.18 | |
Tandem Repeats | 263,857 | 12,612,756 | 1.22 | |
Simple repeats | 24,005 | 4,073,357 | 0.39 | |
Other | 148,035 | 22,608,039 | 2.19 | |
Unknown | 307,137 | 33,145,766 | 3.21 | |
Low complexity | 1,099 | 209,134 | 0.02 | |
Total Repeats | 4,087,374 | 539,498,149 | 52.21 | |
